碩士班 – 應用生物資訊研究室


姓名	學號	論文題目	畢業年度	發表論文	現職
林后賢	106080518	癌症基因體變異視覺化整合分析工具	107	[2] [3]	長庚醫院AI中心
邱翎雅	106080701	建立完整人類癌症突變特徵資料庫	107	[1] [2]	有勁基因
張瑞桓	D0801105	利用分散式記憶體運算技術加速人工智慧基因體變異分析流程	108	[3]	行動基因
李宇璿	M0701213	建立適用於全模式生物轉錄體整合式分析平台	108	[3] [4]	北醫資訊處
吳明峰	M0701209	建立適用於全模式生物之基因體及環境突變特徵整合式分析平台	108		陽明交通大學生資所

References:
[1] Huang, P.-J., Chiu, L.-Y.(邱翎雅), Lee, C.-C., Yeh, Y.-M., Huang, K.-Y., Chiu, C.-H., Tang, P. MSignatureDB: A database for deciphering mutational signatures in human cancers (2018) Nucleic Acids Research, 46 (D1), pp. D964-D970. (MOST 104-2321-B-182-007-MY3)
[2] Huang, P.-J., Lin, H.-H.(林后賢), Lee, C.-C., Chiu, L.-Y. (邱翎雅), Wu, S.-M., Yeh, Y.-M., Tang, P., Chiu, C.-H., Lyu, P.-C., Tsai, P.-C. CoMutPlotter: A web tool for visual summary of mutations in cancer cohorts (2019) BMC Medical Genomics, 12, 99, (MOST 107-2314-B-182-062)
[3] Huang, P.-J, Chang JH (張瑞桓), Lin HH (林后賢), Li YX (李宇璿), Lee CC, Su CT, Li YL, Chang MT, Weng S, Chiu CH, Tang P. DeepVariant-On- Spark: small-scale genome analysis using cloud-based computing framework. (2020) Computational and Mathematical Methods in Medicine vol. 2020 article ID 7231205 (MOST 108-2221-E-182-043-MY3)
[4] Huang, P.-J.; Huang, C.-Y.; Li, Y.-X. (李宇璿); Liu, Y.-C.; Chu, L.-J.; Yeh, Y.-M.; Cheng, W.-H.; Chen, R.-M.; Lee, C.-C.; Chen, L.-C.; Lin, H.-C.; Chiu, S.-F.; Lin, W.-N.; Lyu, P.-C.; Tang, P.; Huang, K.-Y. Dissecting the Transcriptomes of Multiple Metronidazole-Resistant and Sensitive Trichomonas vaginalis Strains Identified Distinct Genes and Pathways Associated with Drug Resistance and Cell Death. (2021) Biomedicines, 9, 1817. (MOST 108-2221-E-182-043-MY3)